YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52843240, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.30
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLSVDLLV TLQILPGFFS NCLFFVLYDS IVLVKRVVSL LSCSGSTGEW QRMLTTAGVR  60
   61 SIWNSFLLDA YKQVKLGEAA PNSKVVKVTG INRCWSISGK THNQCHLLDF ESPDRPLVVN 120
  121 FGSATUPPFI SQLPVFRRMV EEFSDVADFL LVYIDEAHPS DGWVGPPMEN FSFEVRKHRN 180
  181 LEERMFAART LLEHFSLPPQ CQLVADCMDN NANIAYGVSY ERVCIVQKNK IAYLGGKGPF 240
  241 FYNLKDVRRW LEKCYGK

Type	Start	End	Confidence
Cytoplasmic	1	8	0.30
Transmembrane Helix	9	28	0.55
Non-Cytoplasmic	29	257	0.71