YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23092309
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNPANTGVQ LGHDGQRGTL QHFTHFEYVD AKSLTSIETK QQQLQPVLSH QLGTLVDRVQ  60
   61 NTGHKHSLKT LGTNHACVLA YVRLSMSLQT NSEASIVKYG DMREQLIGLR AKMISRLFLT 120
  121 LLLFCGISHA TASEVTSYLQ EMAQEFVLGQ LDIPLDAQAQ VQAASIDERL PLSRCEQHLT 180
  181 ISFPAKMEVR RNTTVYLKCE EDKPWDLYLP VRVSIQKPYV TVSAPVAKGD ILSEGMLTLA 240
  241 YQDQTLIRGD YLSDPTPLIG VRSKRELKPG QPIRLTQVCV VCKGDQVTLS AENSSMQIKT 300
  301 MARALQDGSF GDMIRLVNIR SGKTVQGKVS AVGAVVVTF

Type	Start	End	Confidence
Cytoplasmic	1	112	0.85
Transmembrane Helix	113	132	0.80
Non-Cytoplasmic	133	339	0.99