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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32880107, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPARTMARA RLAPAGIPAV ALWLLCTLGL QGTQAGPPPA PPGLPAGADC LNSFTAGVPG  60
   61 FVLDTNASVS NGATFLESPT VRRGWDCVRA CCTTQNCNLA LVELQPDRGE DAIAACFLIN 120
  121 CLYEQNFVCK FAPREGFINY LTREVYRSYR QLRTQGFGGS GIPKAWAGID LKVQPQEPLV 180
  181 LKDVENTDWR LLRGDTDVRV ERKDPNQVEL WGLKEGTYLF QLTVTSSDHP EDTANVTVTV 240
  241 LSTKQTEDYC LASNKVGRCR GSFPRWYYDP TEQICKSFVY GGCLGNKNNY LREEECILAC 300
  301 RGVQGPSMER RHPVCSGTCQ PTQFRCSNGC CIDSFLECDD TPNCPDASDE AACEKYTSGF 360
  361 DELQRIHFPS DKGHCVDLPD TGLCKESIPR WYYNPFSEHC ARFTYGGCYG NKNNFEEEQQ 420
  421 CLESCRGISK KDVFGLRREI PIPSTGSVEM AVAVFLVICI VVVVAILGYC FFKNQRKDFH 480
  481 GHHHHPPPTP ASSTVSTTED TEHLVYNHTT RPLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle