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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRM1_ASHGO
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYATQPYLEL RERLSQIWIN RYTLLLMLCM VKILLFTSSL RFSLNNSKVH VLEECSNIEH  60
   61 YYNILRNGTP HYMGKMGNYL VAHALEATVE SLLALLTSLA TVVEVVAHFM IELWLGTYAC 120
  121 LLFSAAHGAV EVATNVTEKV IGVANKTLIA AANELDNGLD GLSKVLNKII ETGTKVSHLF 180
  181 KDDDEEHASP EGQFKKINLT IASLRTVKIP ESVNDKLRSL AEKTPDFEDV KNKTKGLVSI 240
  241 PFQTLKNEIN GINATSMLKN RKLMSVPPID MGDAADGVCS ANRDGIESVY RNLNSALIYS 300
  301 LVATAVSLAI VALLCLIPAA WHEYRQWERL SALRDHERTV DCKDPFADTH SSASASTASS 360
  361 TRCDVIQNYQ GVFHRAPTLI GEWVARHTAH TQEGALRIQW LLAYVLSPRA LVPLALGLAG 420
  421 VLVCGCQFLI IHALRIQLAS TSTRDSLQRL ETDTAGLVAH DLSRWADSTN AYINGTEASV 480
  481 NAGLLGWVTT ATTALNTTVA ALLADIDSTV DRAFADTPLH RPMVTVVSCV IGNKLRAIEA 540
  541 GLTWTHDHVR IALPRIHTAR LRDAVAEPDL PTHPAYTAVL QSLSDRLRHS VDRVLHQCCA 600
  601 AVRIELYVSL ALLGLWILQT PLGLAMLLFK SHCRRRNLRR RVP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle