YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44985332
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.55
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRASSICDIV LAVWLLPLSQ TVAQVVQREN DWQSIEASRA GMFGNSVQGG CDGVCEPQEG  60
   61 PVTAIMNMWE NVDASPIPER PEMTDIDLVP PGKQTGNAFS FTSRGSAEAG VGAPTVWSPQ 120
  121 LTGCGDHSRS YSQAVASEPV SAESSQLASQ APEVLEEFSL READEEGDLH NETEFLPFDE 180
  181 WKRIKLDEEK RASVHSETHT RTRIPVDYNR ADALGDEMEI DVGMFTSMED DEPEGKLYHE 240
  241 KFNYASLDCA ASIVKTNSEA QGASSILYEN KDKYLLNPCS AVNKFVVIEL CQDILVEEIE 300
  301 MANYEFFSST FQNVRFSVSD RFPVPKNGWK VLGEFTAVNS RDIQKFGIPN PKIWARYLRV 360
  361 EILSHYGNEF YCPISVVRTH GKTMMEEFKL AQSVGNSQES EVLQPAPDRI LNSTLHNASF 420
  421 LCTGSHHNNN GGPLSFSSNN VSVELFADDM ASQCRAALPP LRFEEFIDGF DDISCGQKHS 480
  481 KSMNFTGTIS NSATEESIFK NIMKRLTTLE TNATLSILYI EEQSRLLSKS FYSLEKNHAK 540
  541 KFDSLVSIFN ETMMHNLETL NVFAKQLKDS SMHLLEEQKL STDQFTSMTI QRLDMMERDA 600
  601 RFQKRMVYLI LVAVAALLVY VLLTREAYID DYMEDDGWYL DSPPLQKAKD KLMRKAARAV 660
  661 STPTIFKNFQ DDIAPMKIRR NPSFSSSSSI SDVSQYLIDN DDDSVFLGRP RTYSKLLAAD 720
  721 ENEIDIDEIM THSSDNSDVS HGMDRLLDAD GTEVSSRESS DGEPK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle