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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45199180, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSRYGTLQ LVLKKTRSYL KRCGLQDRVL MRRVLKSTIN TTCAFIFCLI PAVRQRLASE  60
   61 PSMLPLISVM VHPGRRVSSI IQSTIYVITG LLLGLLYALL GRFAAQRCLG DTWHSWTAME 120
  121 QYTQNYKRYE SALAVLAVFE ICMLFFHGWM RVVNHNYFHV VFPLFIVVHF SFLSPLSIDA 180
  181 AQIAKTFTIP FYLGISMSLF WNLVLYPEFG STYLGNTAID TMNEIHHFLN NAVNFFISID 240
  241 NEVLSDSLYG KKPCTLARLL TLKNEIEIKI NNCALVLEEC TYEISYSYLS PSQLNGLIMT 300
  301 LKSLQRYLSG VTNACQMEFL LLGKAQRDSD SAVEQAMSKE ISHADAEKLL HILRRLKFPI 360
  361 FELHKTLNTC FYMLKILLAD AYDVDFSRVR VPSIFKEQDD VVPVYRQKTD LPKDYEFQST 420
  421 LRKLQDAVSS FDTEFRKELA NIDHDLLTPS DEMFLLSSFL MNFKESTSLL MSLVHEVEQI 480
  481 HKVRKDRERK GWLRGKSLWC PALESMDSFK RWFQRSHQST TENDALRGTL DPGSDTHGET 540
  541 VAARPNIDDL VLRKQQSNET YGSPEWESLP TASNSNTSDR QNIRHLSLQG KTLNIITDAL 600
  601 CRWLRIITVT INCTFRDYRN NFRFAFQVTI ALTLASFPMY IPATREWYMK IRGTWVGFVC 660
  661 ILCLEPNVGA TYFVFLLRAV GVILGAFWAY VSYQAGMNQS NPYLEVFITI FGTAPGFYYL 720
  721 LGSPHIKAAI IQIISIYAVL LATIIPSSIG GSIGENVWKR ILAVGYGGGI ALLVQSTAFP 780
  781 ITARDQLNEE LAFVVGCLAE IEVLYAGELD APHKITISKA TLDRISFLSS NAKSAINRAS 840
  841 AYKTIARREP RLKGSYKEIE KVFTQMIFVL RQIIERMDNI EFLRKQYGFG IVEELNHAVY 900
  901 PYRRHVAAAL GNQLRSIQEA LINKRPLPQY LPSARIAQKR LLNKVRDTLY MNYRRGYDFL 960
  961 SSRSTAVADG NDNGFEQNDD EGILLRVKRP RTKLTPSEID GLRERYLSWN ATGAGFAEVI1020
 1021 EYTEELIQLT IFLVGVNEFK YGFLSRPLYS DWAAQAVTQF DAFVKGYSAV REDVPMRRDH1080
 1081 SGVEGDHLTV YSDMGMELPQ TKTKTMHSHA RRGASKLNLA RIASKDTVEP ETKLMSGNDD1140
 1141 RLDLQLTKTL GDLEDEDEDL YNEQELPIAL RRYLSRKKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle