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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44985138
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYENQRHLTA GGRNNPFLDQ DELQESRQGS TTSLLQNRER EAGATESDYQ GYYAREPPGV  60
   61 RGEPSKVASS RSLNSMGVPN SDIMTPPAFD RYPMVGSRVA SMALPQGAQT GRTPVWGSGS 120
  121 ASEDNSMSSL TSSNPFLGDQ DFSPFGGYPA SSFPLLIDEK EDDDYLHNPD PEEESRLDKQ 180
  181 RFLLDLKHMD KRSAGGFVGI LLLFIGGLML FIVLPVLTYT GAVEHHHAKL TEVLSPYQYP 240
  241 QLSAIRTSLV DPDTPKDARK RKSLKGETWP LVFSDEFNAV GRTFFEGDDQ FWTGPNIHYA 300
  301 ATNDLEWYTP DAATTKDGVL QLRMDAFPMN GLYYRSGMLQ SWNKMCYTQG VLEISANLPN 360
  361 YGQYHGLWPG LWTMGNLGRP GFLASTEGVW PYSYEACDAG ITPNQSSTDG ISYLPGQKLS 420
  421 SCTCDGEDHP NPGVGRGAPE IDLLEGAMDD KVGVGTASQS LQVAPYDIWY IPDYDFIEIY 480
  481 NHSITAMNTY CGGPFQQAVS AVSTLNRTWY QFGEGAGYFQ RFSLEYMNDE KDGYITWYIG 540
  541 DKATFTIYAS ALHPNGNVDW RRISKEPMSI ILNLGISNNW AYIDWANLYF PVTMSIDYVR 600
  601 LYQPSNAINV NCDPPDYPTY DYIQKHLNAY MNPNLTSWEA AGYTFPKNIL TGNCKSSKFR 660
  661 HS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle