YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44985116, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKLSTPVPF SLIARQGPLL HSRPISFKST LEKFKLTPPP PGGVTGNVNE AFQPPEPNYM  60
   61 QGSYHWYYER ISAVSMIPLT LVPLYGAVTG ASVEYPLIDA ALCSMLLIHT QMGLTSCIVD 120
  121 YIPKRKFGIW HNLAMCLLYS GTAVGLYGVY TLETESNGLM DLIGRMWREP DTHPIFSMRR 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	69	0.94
Transmembrane Helix	70	89	0.85
Non-Cytoplasmic	90	96	0.71
Transmembrane Helix	97	119	0.83
Cytoplasmic	120	128	0.79
Transmembrane Helix	129	150	0.91
Non-Cytoplasmic	151	180	0.93