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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44985082
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTLLASKKT QGECAEEGAN SAATGSTVSA GIYGSENEQT SYEYREPAWW RKALYDLFLW  60
   61 IFIRVFDGFF REVRTRNGYR VPRHGPIIFV AAPHANQFVD PVVLMGQVKQ TVGRRVSFLV 120
  121 AAKSLTRRAV GTFARCAMSI GVMRAQDNLQ SAPGRIRVDP SNPRRLLGEG TRFTAFQEKG 180
  181 LIGLPKSLGN VDIESIQSDT ELTLRKEFKM QKPEVRSLLE HGTSFKYAAK VDQSQVYHRV 240
  241 FEHLAHNQCI GIFPEGGSHD RTDLLPLKAG VAIMALGCMH IHPDVNVKIV PCGLNYFHPH 300
  301 KFRSRAVVEF GTPIEIPPHL VAKYGNPTTN KEAVKELLDT ITEGLKAVTL TCSDYETLMV 360
  361 IQATRRLYAG HLSSKLPLPL VVEMNRRLLK GYEAFKDDPR IKRLKEDIMV YNDHLRQYNI 420
  421 PDHQVETARL NLSRNIGLLI SRSLRLLFIG MLALPGVVMF SPVFILAKHI SKKKAQEALS 480
  481 ASTVKIKAKD VVATWKILIS IGVAPALYIF WSLLFVWYLR DSYTKDRFLV SFVVAYLCSC 540
  541 ILTYSALLAE DIGMDIFKSL RPLYLSLTTP KGLQSLQEER CVLAERIAEL VNLLGPQLFP 600
  601 DFDTELLKKK YFATSVSLED EEDRKTQELK RRRLLRKKKE AAAMVPSPIQ ATDSDEITVA 660
  661 DDESDAVSMV NSDNSLSNIP LFSSVHRSES ASSVSTMSST FNYDFDVKQG NIGGKIIDAV 720
  721 RQNRKEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle