YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45198992, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYVNKKRRTH LSASGLVVKS IVAIDGPPVR FRACAFFILV FSPENLAADI DKHLYTSGGN  60
   61 RSISGPTFRC RPAIMPPKKV DKTLQLKGRE AEDLIERYLI EQYRPFGVND IVQNLPNRVT 120
  121 KTNATKALET LVSQDRIICK LFGKAAIYCC KEQQLQLPPN VTEEEITIEA LEQLREECNA 180
  181 LNSDINEWQT QLNQLTRDPT NIELIEQINQ RKVELEETKT RLEALEQGWK PQHAEVTSKL 240
  241 VSQNKVLEKA IKKRKKIMQE AVALVLSTQN ITGETAKADY LVCMISARQK GTILTLPFDR 300
  301 KSLALNL

Type	Start	End	Confidence
Signal Peptide	1	23	0.60
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	307	0.99