YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44985047
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSMPFVHP VAERKNYDSR SGISVSRLHP WFARYKRWGL VAFTLLFGLY WLGFDTLWRK  60
   61 DPKIVLILAA NEGGGVLRWK SEQEWEIERI STRNKLAYVK RHGYGLAIKD LTVAKRYTHE 120
  121 YREGWQKVDI LKQTMREYPN AEWIWWLDSS TLIMEPDRSL EAHIFNRLDS LVDRTLESFN 180
  181 ALKLPVDVPY VDYSQPMDLL ITQDCGGFNL GSFFIRNSEW SALLLDVWWD PAAYEQKHML 240
  241 WEHREQDALE ALYANEPWIR ERVGFLPLRA INSFPTGACS DFSDEPRYFY SEKDRDFLVN 300
  301 MAGCSYGRDC WQEMKHYTAL LEKLNRRWYS FLF

Type	Start	End	Confidence
Cytoplasmic	1	36	0.84
Transmembrane Helix	37	54	0.91
Non-Cytoplasmic	55	333	0.88