YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44986383
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDISEMSAAN QTRWLNEGFM FPTSLRMSDL RSFISDTDRM GSFCFMCFMC FILMLLMYMV  60
   61 LASMYDCGYA LRRRLEKENA AAVACQTPIW LSIYDYHTKL TPSQQNAYLE YSQRMFEQER 120
  121 HRLESEKELS RTKEEAREKA HQELDWLKRI TTWTCTKARY VKWSRRLQRS ISSADMV

Type	Start	End	Confidence
Cytoplasmic	1	40	0.56
Transmembrane Helix	41	65	0.87
Non-Cytoplasmic	66	177	0.56