YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44986375
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVELTEITEE AQLLDSQHQQ QAKNNKFAGE KAGDSTDDEA YSSDEEDDFD ENETLYDRIV  60
   61 ALKDIISPKQ RKRLSQAYST TVWMFQGLFS KGGNVVWALT TSALLLGVPL SLSLLAEQQL 120
  121 IEMEKNFDLQ KDANEILAAG NAPAPATAGL

Type	Start	End	Confidence
Cytoplasmic	1	92	0.69
Transmembrane Helix	93	116	0.73
Non-Cytoplasmic	117	150	0.75