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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44986346
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGEHLSKS LIREYSYYYI SYDDLKNELE ENLERNGGEW SSDLETEFLE SLEAELDKVY  60
   61 TFCKVKHNQV LRRVKDAEAK VRTTMGSIHS VSPAADEEFE VLEEELSDII ADVHDLAKFA 120
  121 MLNYTGFQKI IKKHDKKTKF VLKPVFQVRM DSKPFFKEDY DEIVVKISQM YDFVRTRGNP 180
  181 ARGDASAGGK QQNFVRQTTK YWVHPDNITE LKLIILKHLP VLVFNTNKEF EKEDSAITSI 240
  241 YFDNKDLDLY YQRLRKDEGA EAHRLRWYGG VAADTIFVER KTHRESWTGE KSVKARFALK 300
  301 ERYVNGFIKG TYTANQAFAK MRKENKKTPQ EIDALEALAT EIQYTILKKR LRPVMRSFYN 360
  361 RTAFQLPGDA RVRISLDTEL TMVREDDFDG YDRTNGNWRR MDIGVDWPFK QLPEHDVEYF 420
  421 PYAVLEVKLQ TQLGQEPPEW VRELVGSHLV EPVPKFSKFL HGMAALLPNR VDSIPYWLPQ 480
  481 MDVDIRKPVI TTQINITRPN CDDEDEQDEL LDDAGYSRLG NIMDPEERIG YGSIEPPPES 540
  541 APAAPAFPRT RNDSVIRRKI SSTRNPVVRL YYRAYAALEN YLNFADYDRP RVDAVDTFIE 600
  601 PPPGKTICVP VRIEPKVYFA TERTFLSWLD IGLIFSAIST TLLTYGSQAA MIGAIGFFLT 660
  661 SIGTIYYSAY IYCNRVIDIR LRRAGDYEDK RGPPIVCGML FASILFVFFC NLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle