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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44986342
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSEDSRQRL YNQSIQNAYN ALLSQKRGPR SSGFPSGSSA VAVQDEEPRL SDMSEFSDDD  60
   61 AQVDRAMIQD DEFDEEGGAE ENDDYSRFKR SLLHDNHEDY GWLDDDDTDY TDQADKSFIQ 120
  121 DDDDDDGSTY VYEGWSARRQ GWGRWAVLGL GALFVVWILA GWGGASPASP DLYRRVNQLQ 180
  181 TQLNHLTHEA ETQRKSFRSE LDSTINMVIQ RFEQNIKRLL PGYTSKLESN IAQLESEMQQ 240
  241 INQKLLMENV TLWQKELVIK LNEKLPEKIP IVMEDNSNML LIPELHDYLS TLISQVVRES 300
  301 VTSLPQFKFN INDYIKEVLN NNFQFVDKQY FLTQLHESLM ANKDEIWQEL EPRLAHLTSP 360
  361 DAVPQQFSSV IMKKLMHKIY NANQHQWESD LNIATFAQGS KLLNHLCSKT HHGPVGPMYL 420
  421 LQDCNGCTST YWNCDAAACS WAIRLVEPMY LIKLGYVHGK FSHNLQIMTA APKKINVYVK 480
  481 LYEGTQNAPQ NTKYWSRDSR FMFLGSWDYD IFDNRIRQDF ELPLWFIQGK YLVRSIAFEV 540
  541 ATNHGNNQYT SLRKFVVNAV TVQDLKLMDK FPRDWKIQVP DYSVMIDDQE RIRASRIAQL 600
  601 HNAGSVPSFG DDELDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle