YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MED4_ASHGO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANQLSKAA TPKATPLGAA QGASSTSLHS FTSFQPQDAS HVEQNKLHSV AIYEDLCQYE  60
   61 ESLQRLVTSV DKFQPDLEAA QELIEIDSKL YSNLAQLPKY DLIDSQLKKL EEESKDIDER 120
  121 TAKILGILGE CYNDLNSLPM VEQVEFEMAT MKKQKDKVNS SVLLEYAMKL SKFTRVPPTF 180
  181 NKDAIGPNNF IWPAEDAIRR GMLAMASLKS KELTSLPGQS DQEAEQASAG KEADTAGPGV 240
  241 STLEPANGGH NRRGSFEFTG IRKPPPASDA DSSVVDDGDA SMDLDLNLFN PDEF

Type	Start	End	Confidence
Signal Peptide	1	25	0.61
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	294	0.99