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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45201256, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALASTTGA GMKLRGRRGP AAEWTLNGMD YEYLREEVRR ATTYAGGREE TDGRVLGRLL  60
   61 GAFRAELSNV NLFVSLKMRE ITARLETVEA GIVEWRRRKV GEPGARALRL RRANGQLAQC 120
  121 SADLQRLARY LLLQKAALRK LTRRLVRYYP YDEAEVEGFV AALYACDELQ QGHEGVVFTA 180
  181 VDLEPYLLEV SLIMGVLYDL EMKDRSVERA REPPNNVLGR PITSCLTFDT LFLGKYHLLQ 240
  241 RLLISQDNVG ELKFLLMKLD YQMIDDDVLS TSRQLANGAL PGGDPIKGSC KAQSLRFFDF 300
  301 GAARPARMRR NSSLPDKLRT LSQLRTHMYP LDKQFMTDEA YNQHPNIFVR GQQDDACLLM 360
  361 CHVGGMRNHI ITQNLPLPLV LECLTKRQWS HKNIPLSALD KLCLDWVRTN NLGLSDFVIS 420
  421 VKRTRFFTKR DEVINGTAFT SVYLITLDEE VFINNTLKLP HAFVEVRKLT NTVVTPNKST 480
  481 NKIDTELSHL IDVILDMSLS CYPLAPSNTL WKMAYSLKDT PAEEIERSMY AALAAADFQD 540
  541 SSNISGDILF SIGRRRLDQM STPTVPQRTP SLAKSSHKSQ DAQSPSSSGE TPQRKRYWNE 600
  601 LDEQNDADAQ DCFYRDPEEL HTGDYEAEHG FIKFDKNFIL NFYQYLHKLN HIFCYQKKPP 660
  661 KEYTVVPCSG DSEITRSELT PLIRQNSEAR SYSALEVQST LPGGGSQLQV PNWDDEAALV 720
  721 CYDELDVLYG YKHDEVVSLF YLTTLLVSCI TTGTTVGIMF SLFSALGNDQ TEFEGSNYIT 780
  781 ALILVSLVVS LMLSSFSLLL LFSRYHMAPW WHYSSCIIVF ILVTLCVCYG VVKVFI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle