YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44986053
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSSVRNPAL AKVKTSLLRT LSTTGAVRAE AVESAGADEE VEIRLPETSF EGYMLDVPEL  60
   61 TYKVTKGNLL QMYKDMIVVR RMEMACDALY KAKKIRGFCH LSVGQEAIAV GIENAITKRD 120
  121 TVITSYRCHG FTYMRGASVR AVLAELMGRR TGVSYGKGGS MHMYTDGFFG GNGIVGAQVP 180
  181 LGAGLAFAHQ YKNEDVCAFA LYGDGASNQG QVFEAFNMAK LWNLPAVFAC ENNKYGMGTA 240
  241 ASRSSAMTEY FKRGQYIPGL KVNGMDILAV YQASKFAKHW CVSGKGPIVL EYETYRYGGH 300
  301 SMSDPGTTYR TRDEIQHMRS KNDPIAGLKM QLLDLGIASE EEIKAYDKAA RKYVDEQVEL 360
  361 ADAAPAPEAK MSILFEDVYV PGTETPTLRG RINDDTWDFA KKGFAFRD

Type	Start	End	Confidence
Signal Peptide	1	29	0.91
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	408	0.99