YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33243044, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLLGYVDP SDARFVAAVL TIAFNPLFWN VVARWEHKTR KLSRAFGSPR LACYTLGGAI  60
   61 LLLNLLRSHC FTQAMLSQPQ MESLGGPTGY RLGLALLGVG SVFVLSSFLA LGFTGTFLGD 120
  121 YFGILMEARV TRFPFSVLDN PMYWGSTAVY LGWALMHASP TGLLLTLVVA AIYKLAILFE 180
  181 EPFTAEIYRQ RGSQARKRS

Type	Start	End	Confidence
Non-Cytoplasmic	1	12	0.78
Transmembrane Helix	13	33	0.89
Cytoplasmic	34	50	0.74
Transmembrane Helix	51	71	0.84
Non-Cytoplasmic	72	91	0.69
Transmembrane Helix	92	119	0.83
Cytoplasmic	120	134	0.54
Transmembrane Helix	135	156	0.56
Non-Cytoplasmic	157	157	0.35
Transmembrane Helix	158	179	0.75
Cytoplasmic	180	199	0.74