YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YME2_ASHGO
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMFLEMQRAF MLHGRRAVTR SAVGVRYISE DIQQKDAQAG EKATATATGV IYKSDEETLM  60
   61 YFDNVYPRAT SLWRPTQWYN ILLSNQSREA VREKIMRLAS PASNPVHGLE LRSTIPIKRD 120
  121 GGVFATFRVP REYTRAQVNA LIQANTQQES SKSLLAAFTR AAAFPVKGVP WIEDLKRLPN 180
  181 NVVRVEVEGP ALSEEELYSL FRRYGTILDI YPAGKNGYAT IRYRSFRGAI CAKNCVSGIE 240
  241 INGSTLHVKF EPVVRAHAIR DFFVNHPRIA IPLLIALLSI CAVLIFDPIR EFSIEQKITR 300
  301 MYTLSRDNFV VKSILRLTSY TVSSVKHLWG YDDDQPEKRQ LWQERVEKVN DLKMWLEENN 360
  361 NTFVVVTGPR GSGKHELVMQ HTLHDRPNVL YLDCDTLIKS RTDSKFLRNA AHQIGYFPIF 420
  421 PWLNSVTTLV DLAVQGLTGQ KSGLSESKET QFRNMLNTAM MSIRHIALSG YKATLHSGDD 480
  481 VTTVKEEDYL QQHPERKPVI VIDRFSNKAE INGFVYKELA DWASMLVQMN IAHVIFLTES 540
  541 VSPNQLLAEA LPNQVFKFLF LSDASKDSAR SYVLSQLYPS SPAYSEKMPA ADADANEEYR 600
  601 KEIDRALEPI GGRMLDLQAF VRRVKSGEEP SEALEKMVEQ ASEQITQIFL SERSEPIKTA 660
  661 QAWELIELLS QNDVVKYGDI VFRPLFKSSP EAGLLELEKN GLITISRNRG VLQDIRPAKP 720
  721 LFKAAFSYLL QDKDLSIVLR TGYYLRLIAF ETGRIKKWEE ELRLLAKVSD QRICKSRLNY 780
  781 LASKIDASSG VINSCEDKVK EMSKRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle