YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44985028
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMARRIKASH WRRYVFFAIP LLIGGLFLLR FVSISNSKDL QTVLQSLPTE LRSTLDLSRT  60
   61 KEDEMMGHFE QFMEEVVRKQ EDQIRRLDRE RKALEKKLQE LKRPASHSTL REQLAAVHEY 120
  121 GTTKKFPAYV WQTWMYSGAD DRMDNRLRDY EQKWGKKNPG FVHEIVNDDT AKALVHYLYA 180
  181 SIPEVIEAYN VLPSKILRAD FFKYLILLAR GGVYADIDTN PHQPVPNWIP ENVSPTKIGM 240
  241 IIGIENDAKT RDWRSSFIRR LQFATWVIQA KPGHPIIREV VAKITEETLR RKDDGSLNSN 300
  301 LRDDKNIMSW TGSGAWTDVV FTYFNDYVQS GILQKITWKD FHKIPRPKLV GDVLVLPQFS 360
  361 FNAPTSQDSS AGDKNFYYAS HEGMKSWKE

Type	Start	End	Confidence
Cytoplasmic	1	13	0.86
Transmembrane Helix	14	34	0.89
Non-Cytoplasmic	35	389	0.99