YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TVP18_ASHGO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSWKSFVN VPGILADLRS FNFSVYGRWF GYINILLCLA LGIANIFHFS IVIAFAIVAI  60
   61 VQGLLLIFVE VPILLKICPL SDNFIGLVKK CDTNGRRTLL YTALAIVQYA SLSVQVTSLL 120
  121 AVAIGLTISA IFYGTGYLKK QEFLEGNVIR NPTDPAFMRE AAVREVL

Type	Start	End	Confidence
Cytoplasmic	1	28	0.78
Transmembrane Helix	29	48	0.87
Non-Cytoplasmic	49	50	0.49
Transmembrane Helix	51	75	0.78
Cytoplasmic	76	97	0.66
Transmembrane Helix	98	112	0.49
Non-Cytoplasmic	113	113	0.37
Transmembrane Helix	114	137	0.77
Cytoplasmic	138	167	0.59