YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44985757, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVIGLTGGI ACGKSTVSRR LHERYRIPVI DADAIAREIM RPGERAYQRV VERFEQRVPQ  60
   61 LVQANGELNR AALGAWIFQH AEERQALNAI THPEIRKRIF FRVVDCYMRM HPMCVLDIPL 120
  121 LFETGLDVFC GVTVSVVCDQ KVQIERLLLR NAELTREEAE ARIRAQMSME ERIELSDYVI 180
  181 PNNDNYEVLF ETVDQAVTYI KPYLLTVMLH YFLPFGIVSA LAVVLSKYYK KTVAGTSRRK 240
  241 RRKAKERAAK KRAAEQKAAL KASQPPLYKR LLSRKAE

Type	Start	End	Confidence
Non-Cytoplasmic	1	207	0.86
Transmembrane Helix	208	229	0.68
Cytoplasmic	230	277	0.67