YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPN3_ASHGO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRVGVLVLG PAGAGKSTFC NGIISYMQSV GRRAHIVNLD PAAEASEYEF TVDIRDLISL  60
   61 DDVMEELSLG PNGSLVYCFE YLLENLDWLD EEIGDYNDEY LIFDCPGQIE LYTHIPVLPT 120
  121 IVRHLQNQLN FNLCASYLLE APFVIDTSKF FSGALSAMSA MILLELPHIN VLSKVDLIKD 180
  181 EYSKKRLKRF LNPDPMLLVD SANADTNSKF HQLNKAIANL VDDFGMVQFL PLEAKNPDSV 240
  241 STILSYIDDI TQWGEAQEPK EPNDALEIED M

Type	Start	End	Confidence
Signal Peptide	1	20	0.79
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	271	0.98