YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45200937, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDKALRAGE DGTEIRNALR SLQQELRVIH ILYHRNKNQH RVATWWKQLN SLKRSVSQVV  60
   61 TVTSKPVRTE ADLEALAGLL RRFAVRQAPA MYYEFNGVIA LGQFVTLGVV LVAALARVWA 120
  121 LYGQLREALG LLPVRAAQAE RECDVAPTEE IGEEVAVAVA ASPPGAAALP GGKRIKKKSK 180
  181 SKRSAIDDIF G

Type	Start	End	Confidence
Cytoplasmic	1	94	0.69
Transmembrane Helix	95	120	0.78
Non-Cytoplasmic	121	191	0.57