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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44985672
Protein type: Transmembrane
Type Confidence: 0.53
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSHEAVSTG EKRLSGWQAR CFRSEGFSTR FIVLYLLVSL WSGQSRKNSA RDIGQTRKEN  60
   61 MSSNNQQGNG QVPQLTPSSM RQLAYKFRTL VSEAQQVGVR TPEGLELLKK ASNIKAIYET 120
  121 YHRQQAQQAF QVRNPAPAGQ LAAAGTGQAT APRPTSSVAS NIKMLLTPQQ REAYEKLTQT 180
  181 FNESVKNITG EYEFLKKNIE VLDTEIKNRQ GEPMTVKQLE TKKNELLTKL TGLNTQFQAL 240
  241 PKKFQEDKKK FYIECAATNV NLKKFLQATS QQQRASAGNT GTTNSPANTQ LGANIGAASA 300
  301 ATPAAANAAP TGSSAATPQS QRQQMQRPNS GANRYPAQVT PVNAAANQNN SGTARPVIFK 360
  361 QPNPSIPIPE NITPLTTTSV SYRSNRPTIT SGSAMNASAL TMPVMTKLPP YEVDSERVMS 420
  421 KRKLRELVKT VGIDDGDGET TVDGDVEELL LDLADDFITN VTSFACRLAK HRKSDNLDVR 480
  481 DIQLHLERNW NIRIPGYAAD EIRSTKKWNP TPAYSQKLQG ISSARAAKLA PATTANVTTG 540
  541 SANAAAVATE SNKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle