YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44984871
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPIVRVILQ ALTMLQLCLC HISLFPLAEE MEEDFLAKAE AGEWVDLHVF DGQWPKRPEH  60
   61 VTEKERTIAD GEIPQYVLDH CPLVHLYSEE IYMPSDVKEF VQHVRVEDKR GNEVRRGPLD 120
  121 IATSFAGLAG EDTSDLYLTA LEDFSQNPNW LLGYAPDYGT GRISNGPSVL IVVDKGNGWV 180
  181 DAFWFYFYPF NLGPFIMGAG PWGNHVGDWE HSLVRFLNGK PQYLWMSAHG SGSGYVYDAV 240
  241 EKKDHWRVVD GELQRTVLKR PLIFSSRGTH ANYASIGQHA HDVPFFFSPL SDFTDRGPLW 300
  301 DPSMNFYAYT FDGTTVTPYS KRERELGTDW LYYNGRWGDK QLIWSDKRQH WCLLQWRYID 360
  361 GPYGPLKKNL QRTGLCQRGR WWTFHQGCPI RRMIKRGQGL DAERNDLVGD NCGIALYKIR 420
  421 PKWLRALLRL ITWQGLFCTF MDYFTG

Type	Start	End	Confidence
Signal Peptide	1	20	0.86
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	446	0.95