YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44984866, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLAASSFG NPPAGYISPS FPSLLWTADD RANGALLYYT KDIVRFTIFW TLILVGGMYG  60
   61 AVGLIAGYSH RRITGGVGIL AIYLLLGALH AILGGTFSGL ITAAIYRAAL IAMSTWIPLA 120
  121 SAVVQALYLL CAAFVAQSKL I

Type	Start	End	Confidence
Cytoplasmic	1	45	0.54
Transmembrane Helix	46	68	0.91
Non-Cytoplasmic	69	78	0.45
Transmembrane Helix	79	106	0.79
Cytoplasmic	107	113	0.42
Transmembrane Helix	114	136	0.87
Non-Cytoplasmic	137	141	0.49