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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44984842, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRHTSRRLL PWACGAVAAA AAVGAVSRPS LVNEVPTELK LERRAPAPPS RSELLEKLQK  60
   61 TNQFDVLVIG GGASGAGSAL DASTRGLNVA LLEMNDFASG TSSKSTKMAH GGVRYLEKAV 120
  121 WELSKAQLDL VIEALNERAH LLYTAPHLCK VLPIMIPVYK WWQVPYFYVG TKMYDFFAGS 180
  181 QNLKSSYLLS ASAAGEVAPM LDASKLKAGL VYHDGSFNDS RMNATIAVTA IENGATVLNY 240
  241 MEVKRLIKNP EDGKVEGAVA MDRETGKEYA VRAKVVVNAT GPFSDRLLQM DNHPEGLPDD 300
  301 KILDAINKDS TIATEVAVAN PKMVVPSSGV HIILPSYYCP KNMGLLDAET SDGRVMFFLP 360
  361 WQGKVLAGTT DIPMKQVPAN PTATEADIQD ILKELQHYIK FPVKREDVQS AWAGIRPLVK 420
  421 DPRKNLSDTQ GLVRSHLVFT SKNGMVTISG GKWTTYREMA EETVNEVVKV GKFVNAKPCI 480
  481 TRKLKLSGAE HWDANLPALL SHQYNIPPLL AEHLSQNYGT KAAQVCELFE DDRANMLPVS 540
  541 LAADKPTSID YNAFRYPYTI GELKFTMTHE YARTPLDFLM RRTRYAFLDA KQALKAVDGT 600
  601 VKVMGDALGW DSAKRVAETK YAIEYIKTFG V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle