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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44984830, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTKSQVTRR VRTSIATPED GVHGNNQHKG ILDPHLSVLE MLDRQDGDGA GQVEEGAVMT  60
   61 VGKRRVERSL HHSISESWQA IKRSDYSFLS GTHEVGAMHS SVGILSSSDT SEEEAEMRPS 120
  121 AHGTVHLGSS LASPMRQLLV EEDNSCAEED DCQTVTISMP SSSTSLVMPK LSLSQRLGEP 180
  181 QLLLVGQPAR KFWLTIPKCY QKLFDVKNLG MVTRWDVGQR YLAVMVVFHD IAQAPELLDG 240
  241 LCEKAPCPTV IPVCQKGQKS TLAALLKRYT ARKCIRVYCS PIIMSNHHEK HRLLKHLHNL 300
  301 CNESESGYET ELTVKSKKQH RRPRKKDAGP VALRHWAIWT ASFTIGIGIG CCISLMATTR 360
  361 FTFFSSAPLP LTAVIPAQIP SSVASDKPPH RLVPHFYMLC KTTIRQLGTS LRLFFFEKFE 420
  421 SRTWVHIFGM DLHSDDPLAS LGRLMPLDFI ML

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle