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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44984812, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGDDMVQVG NNRTVPRNMM SRRSPSILVT DARSTKKRSS APFAGNANTR RDKTGGSMPT  60
   61 VIENRAGRRM GPMGGREFMP KAGSGRTRQG KFSEVSMDNI LSEMSDVPSG RRQERLSSSS 120
  121 FEYERRPAHY NKTIRPLPSR TSKTSEKFVL IPDENVKRFA QGFHKRSASR VFSELSYGEH 180
  181 NTAGLPSITA YNVAEGFNLN LASQFLKETH NVSIRRYDEC LYVPYCLPLL PGKDGFRIRS 240
  241 NVSKKMVGGK TLIDRLIDTS EQRDHHYEYY SGVETVEDMH NNFEINENGN GRDPDGLRNA 300
  301 DHLAPLSSNM QSFDPSEPQF FAEELSEIGL HPIQDSSSEQ HEREKVLDAQ QHAEIFIFNY 360
  361 GVIVFWNFTE LEEKNILGDI AFSGMKNMVT RPLDEQDIEI EQFHFEYDMD TERPRIFNDI 420
  421 ITLRSGDHII KLTLSHAIAQ STKLSRFEKR ITPILGTVSK LPKRLALYGT LGLKREQLLK 480
  481 KSGKLFKLRV DVNLSSSVLD TPEFFWSFEP SLHPLYTAMR EYLEIDPRVQ VLNDRCKVFL 540
  541 EFFDICVNSI AEKDMARITW WLVIVIFISV LVSTAEILAR IFHYKKTLGT T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle