YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44984655, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLQLLAVLG TIFGFLFLTL SIAAGLYYVS ELVEEYSEPT RRFLNRTIYA VIATYALLLV  60
   61 FDSFPFFLTC FSIASHVVYA QNLRKFPFIS LSSPTFVASC VLVALNHYLW LRHFNNNDVP 120
  121 VRFRMDPGYR APRRTSLAEV TSFFALCVWF IPFALFVSLS AGDNELPTAM GKKDDDARDA 180
  181 VTRKATSLLK ALIDSVRPYF HSGARVFRNT S

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.62
Transmembrane Helix	7	29	0.92
Cytoplasmic	30	47	0.62
Transmembrane Helix	48	73	0.82
Non-Cytoplasmic	74	87	0.57
Transmembrane Helix	88	110	0.87
Cytoplasmic	111	136	0.62
Transmembrane Helix	137	161	0.81
Non-Cytoplasmic	162	211	0.68