YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44984641
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRERLAASR RIFRQTPVVY FSHPTQGANQ YHMTSEARRN RSGASHTSAG EVGGPLQRFA  60
   61 GLVKTLQFAW FAGHVVVLLT ASMYLLGVRG SSDFHQVVYS LLYLGVLESF GIIVYQQHFN 120
  121 LAGKQGRGRS LQEFVHDENF LYCMLAAMWL LTPRFAATVP PFAIFSSFHA LTYLKGVLLP 180
  181 VVFRAEENNS YMRLISGFLR DNHDKSLSWS CNSELACFLV VFLRALACRR RSWIVLALYS 240
  241 LFIKARYEKS ANMRAVVRKW EVRADGVVSH PRIPAQLKRA YAKSKMQINR LGSFSVFAPF 300
  301 QKPSVAAGKK PMGSPASKHE

Type	Start	End	Confidence
Cytoplasmic	1	65	0.96
Transmembrane Helix	66	88	0.90
Non-Cytoplasmic	89	96	0.86
Transmembrane Helix	97	119	0.88
Cytoplasmic	120	139	0.89
Transmembrane Helix	140	164	0.71
Non-Cytoplasmic	165	205	0.69
Transmembrane Helix	206	227	0.61
Cytoplasmic	228	320	0.77