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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ROT1_ASHGO
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYVSWSAAA LLCASFFSTV VLAQSAKDLY GTWSAKSNQV FTGPGFYNPA DELLIEPSLP  60
   61 GISYSFTEDG FFEMATYRVS GNPRNLACPS AVMTFQHGKY EILANGTLIL RPFEVDGRQL 120
  121 VSEPCVDKGV STYLRYSQVE TFQRFAVELD EYQGKHALHL FQFDGSPVQP LYLAYRPPLM 180
  181 LPTITLNPTD HAGATATAGP GHRKRSLGEL VRAGLQDKHK TTAVRNPSLF NAAFYWWCSA 240
  241 GVIAAGTVLF FMV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle