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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45190906, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEQEYWDED LDPKSLKVAE LRKILLENDI TFSGHDKKSD LVQLFRSNAR IIRANALRVK  60
   61 DARPDSAGVQ KVRRDGKVKE GAAQRAGGKT RRATRISSAG SAEGDSTFEN TSGVAEVSSP 120
  121 FSDVNEFQLH ANPRKRRKDE ADAEDESDGD GGAAARRVKP KRGKVTADQH RLASTTAQER 180
  181 NARRSPIAEK VQSKRTPTKT GHRSLMIHKF ESSSEDDSSA TTTPAKKLLV FDRSSEKKPE 240
  241 ITDFTYPARK YAAPDLSKLK VSPEFKAKLA QLQASSSKAQ SPQRAGVTDT VESDDSSVNQ 300
  301 AESNSEDNTE TNSTNSVSLR RLREQKNNVV APSTKHNVSS NKGTPVISGN KAVVTSTKDT 360
  361 PVKSGTRSGA AAIRDTPVKS GTKPGVSSTK GTPVASGTRH AVSSAKGTPT KATSERLTHI 420
  421 TTKDSSNNRA KTRKQHKVEH DKRESLKSES LRVSSSKAQS TSVNSKIGRS NTKAEECVES 480
  481 GPEEVPEDKV TDHSELEEVS VNEETAIETV GGVRIFFNYL RHCAVKLFTF LLIVVPILFG 540
  541 LWYREQRVLI GYCGHEINLP TFTNTDSSPF LSQLDLFLRE AKPACLPCPE NAICYPYMKI 600
  601 KCRPDYSVTP SILSLYGLFP VSDKCVKDSK REKLIAEVVH KSLELLRTKN AQIQCGECED 660
  661 DTISGISENE LYQIFFESRA PWMNEDEFRD IWQQVVKDLK TQPEIVCRQV SIDRLNVLPF 720
  721 VLDNDLLTNL LQVPTRRTFI PSDTDDLFEA DDIQEQERYL QHTEEKEYFR SQCTKYIGIR 780
  781 CQFERQVYRT YKRFTLIFWG SLIVVVIMQV LKIKLQHRFK QQGMVEDLNS QVIEKLQQAA 840
  841 QSKTEGEPRY LSTVQLRDVL LSDVADLKYK NHLWNKVVHK LESNNTNVKT MLMEVHGEIM 900
  901 KCWEWVGPVE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle