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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NTE1_ASHGO
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDGTYVNSS VEAISGEADT AAVAELANQM VMNFLYESSS WLAQSTGPFL WKGFRFLFLR  60
   61 LPSSLLVYLI NGTVPFYLVV LGSVFTPIIV YLILRSRVLS AYSRLKGDNE DEVIDKKKQL 120
  121 VNDSEAMLMG GPDGKRRSGF SSYLDEFLSA IKIFGYLDKL VFHELTKSMR TQRLEQGEVM 180
  181 LLDDSVGFAI VVEGGLHIYH KIAHSQGSTR ESMPLPEDRS FDSNEDDLTI NGERFQLLNK 240
  241 VKAGNPVSSL VSILKLFTDN HTPTVVDSSK SSPKQSAQVP IRQLISPFLD GNVERNKATL 300
  301 NMKQVPTAEY EIPSAERAGS NVSSFTQQLY ESMLPKDHAA EDVREPLPEI VAYAASDCAI 360
  361 AVIPASSFKR LMVKYPRSAS QIIQVILTKL YRVTFQTAHS YLGLTKEIMH TEVVLNNSTN 420
  421 FELPYYLQEA ILRKIKNGSK ESSVQESIHR ATLRSKNVHA HNSPTPNKIS RHIALESRDQ 480
  481 YNPGDLLSNV PLSRKGSKTA SSSSVSIPRI SSLRHQKEAA SSPLATLRRL EGNDSQNFAP 540
  541 LSSSSPMSVS EKPSVVGGGA HDNISQISFS SALEETEESS WRMALVESMF GYLGITNESI 600
  601 MPPTEDLLFL NNRASSGSSV CSVSSYSHPQ TINQDLFRCL SPELVRTKKK APRQKYTEEM 660
  661 PINVDFNTAK EEFAEGLETL FIPSGATIVE QNGNNKGLYY IVSGELLVCW KNEEDNIEYV 720
  721 LYTVKPGGIA GYLASLIGFK SFVSLRAKTD LYVGFLPIEV LERLCDKYFM IYLKIAETLT 780
  781 KLLSPKILKL DYALEWIHLE ASETLFNQND PANAIYVVLN GRLRQLHQKS KNEERLSRPT 840
  841 TQRKKRKDDN QPNVQVVGEY SQGCSFGEVE VLTAMNRVST VVAVRDTELA RIPRTLFEVL 900
  901 ALEHPSIMIR VSRLVAHKIL QRSSDIREPT KIVNSANGYR YDFNLTIPPS AGTSSWGNNS 960
  961 DGGSISYKTI TILPITYGLP VEEFANKLVS TFRQVGRSTI GLTQCTTLKH LGRHAFDKLA1020
 1021 NLKQSGYFAE LEELYELVVY IADTPVKSSW TSTCISQGDC ILLLADASSD PEIGEFERLL1080
 1081 INNRTTARTE LLLLHPERYV EPGLTHKWLR KRTWVHQHHH MQFVSSQNPS ERVDSKAPPI1140
 1141 PGAPPNLIGR LKKRERLNQL TKRTQENFAR LLPDSIKLTV ENISMKYIQK KQKYYTPVSA1200
 1201 HKNDFLRLAR ILSGQAIGLV LGGGGARGIS HLGILKAIEE HGIPIDMIGG TSIGSFVGGL1260
 1261 YAKDYDLVPT YGRVKKFAGR IGSIWRMLSD LTWPVTSYTT GHEFNRGIWK AFGDIRIEDF1320
 1321 WIQYYCNSTN ITESMQEIHT FGYAWRYVRA SMSLAGILPP ITDNGNMLLD GGYLDNLPVL1380
 1381 EMKARGCKTI FAVDVGSVDD RTPMDYGDSL NGFWIVLNRW NPFSKHPNVP SMAEIQMRLG1440
 1441 YVASVNALEK AKTTQGVVYF RPPIEDYATL DFAKFEEIYQ VGTAYGATFL HELEQNGKLP1500
 1501 RIPGNEPANG PGIHLLHRRN SI

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