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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44983526
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFKKASTVA LSGWLLPALA AAQGPGTANH ANLVPRTAIG GAGVQVTPYD NCPQYDFTWK  60
   61 AKNSGYAPYK VSVEKVEWEY DNVYTVTIRA KGTDPTPLKS LWSLKIIGVD SPDGSSFQLF 120
  121 GYNEHTFLID NPSDYQATFR VYAQDGGDGK VCMPEYKIQY EYCQGHTDCS DWKYGTTAID 180
  181 LEMGCSNVDN MNHSQKDSPA YCWPRGELPH TKPPHSTEPG TETGTTTTVP VTPTSVLPKT 240
  241 SDSMSSESVS STTSCSKTTK SKVPPSSAPE TPTSVLPKTS ESMSSESVSS TTSCSKTTKS 300
  301 KVPPSSAPET PTSVVPKTSE SSVPPSSAPE TPTSVVPKTS ESSVPPSSAP ETPTSVVPKT 360
  361 SESSVPPSSA PETPTSVVPK TSESSVPPSS APETPTSVVP KTSESSVPPS SAPETPTSVV 420
  421 PKTSESSVPP SSAPETPTSV VPKTSESSVP PSSAPETPTS VVPKTSESSV PPSSAPETPT 480
  481 SVVPKTSESS VPPSSAPETP TSVVPKTSES SVPPSSAPET PTSVVPKTSE SSVPPSSAPE 540
  541 TPTSVVPKTS ESSVPPSSAP ETPTSVVPKT SESSVPPSSA PETPTSAVSK TTESVSTHRS 600
  601 SSQSYTASTV TTTVSGSVVT LSTTVPCEPT GTTSVPPSSA PETPTSVVPK TSESSVPPSS 660
  661 APETPTSVVP KTSESSVPPS SAPETPTSVV PKTSESSVPP SSAPETPTSV VPKTSESSVP 720
  721 PSSAPETPTS VVPKTSESSV PPSSAPETPT SAVSKTTESV STHRSSSQSY TASTVTTTVS 780
  781 GSIVTLKTTV PCEPTGTTSV PPSSEHKPSG STNSSIPVTT GTSVLPKTSE NVSSTTGSSA 840
  841 ESYTTQTVTT TVSGSVVTLK TTVPCTPTGN TSVPVSSAAK PSASTSVPSS SGKVPSGSAG 900
  901 SSIPATGTSV LPKTSENVSS TTGSSAESYT TQTVTTTVSG SVVTLKTTVP CTPTGTTSVP 960
  961 PSSEHKPSGS TNSSIPVTTG TSVVPKTTEN VSSTTGSSAE SYTTQTVTTT VSGSVVTLKT1020
 1021 TVPCTPTGNT SVPVSSAAKP SASTSVPSSS GKVPSGSAGS SIPATGTSVL PKTSENVSST1080
 1081 TGSSAESYTT QTVTTTVSGS VVTLKTTVPC APTGTTSVPP SSEHKPTGTT SVPVSSGQKP1140
 1141 SGTTSVPVSS GQKPSGSAVS STPVGSAPPK PSGASESIIV ITSDDITTTY TSVIEQVVTI1200
 1201 TNCDNGECET VTTFAPATEP TPVSASASAS ASTAPVTTSP VHETGSSVPA SKAVPSVPVT1260
 1261 HAFVHNTGSS VSAPPNATPT PVPAAEDDTT TIIVQDIVVT VTYNEAYAES TTTHMVNGTT1320
 1321 SVATHTTKVK ELPPVVTGTG TNSNGLTTVT ATLGNKTTKT VCPEGGCQLS TPTTVPTATE1380
 1381 TPVGGQPTGN KPGAQCSEGN CHTSAPPHPS VTSSFGYPSR DSSSATAPST YISVFDGAGD1440
 1441 KKHPSLLAVA IPFFYLLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle