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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44983522
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFRFGLSGL ICLAQTAALA FLVVSCITAP VVSDLGLADA DGVQYGVFGY CIQDRGCSPV  60
   61 SASYGPERVF SGTQWAMGQD MRRVLGRILV VAPVAAGLTL LAVVSNFVSQ FSGVHRHAGI 120
  121 FVSNLLWTIL AFFSSALLSI GAWHSVLAAR SRGCAYVWLA AAVIHLFCVP MTFLAHSQVC 180
  181 QDSDDESLHG ALSSQKLMKR EDDYANSFNM NELHKTAIDS DVKQPGYYKV APVTTGDVTD 240
  241 STKTDYTDIY GSQQAPPPQP YLRSTPQNRN SYVATEPQTT SAGGNGEESG KWEQPTLAPY 300
  301 PMTGGFSAQG YNRPSGPPIP PYPSTGSTKD RTANYDRERH DARSGMGPTG DPSYYPAGME 360
  361 GVQQPYSPIN DASKNGIPAG STGDHAKNKL PYATSTTARN ADPSASGVRG PYAEGLPTAS 420
  421 SSNYEVTQLS SGRITARPAQ SPAYPSSAGE PVKQQPYPRQ SRNLDYPNQQ DFDDEEFVRQ 480
  481 NTVDPEERPP IEEDDGIKDD DSDFTSVSQR GINPNYYTIA GKQAPYPQTF SAPLPHNQAI 540
  541 YPDQPYAGPP PPDAYQTSNS LGMSRQGAHQ QYVSQGYTPQ PQGYQASGYY SAPSTSQPRA 600
  601 PDTSDMLLQN NPDFMIGGAA SNKAARFGGP GQRVQQSAGS TTAPATLYKP AYKKRMQKSK 660
  661 GMVAASLSRD SPYGGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle