YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SET2_ASHGO
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSSSPSVS LPLPSSATLF LDREDKTEEA LGTFIELEQC TYTHKRLGDS RSNEFMECDC  60
   61 FEDYKDEQNH ACDENSDCIN RLTLIECVND LCTSCGDDCQ NQRFQKKEYA DIAVFQTEKK 120
  121 GYGVRAERDI EANEFIYEYI GEVISEADFR DRMVDYDMRG FKHFYFMMLQ AGEFIDATER 180
  181 GCLARFCNHS CNPNAYVSKW DVAGKLKMGI FAHRKILKGE EITFDYNVDR YGATAQPCYC 240
  241 DEPNCIGFLG GKTQTDAASL LPQNYADALG VRPSVEKKWV KMRKALGEEI DKSGSSNINI 300
  301 EFVESLELEP CVQYSDVNKV MSVLLQIDDK FICSKLLERI LLTSDETMRY QIIKLHGYKC 360
  361 FSKLLGLFET DENTQHRILQ YLSDLPKTTK NGIVSSQIDK KVESLLQKEA LKEDASALLE 420
  421 RWNTYETYQR IAKKDFTKTS NGLNKVTDFR RVRLPLGWEI IHENGRPMYY NAQRQIKRVD 480
  481 PPSDTHLQRP ARTTPPQRYN GGFYDRTTKR PLDPESFEKR KRQRLEWEQQ KLAKKKQEEV 540
  541 RHLKEKLEVE KQKKSELEQI IEDANKQQEQ QRLERLQKEK ETAERRERRR QTHSASRIEH 600
  601 KWNKFFAQIV PNLIKSYATS MDRARIKECA RDIVKILSSK ELKKDATKVP PAEVTKEKRK 660
  661 KVNEFCKSYM DKLLAKMHEK AVSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle