YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44983293
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAAAGRAF RRFWQSETGP RTVHFWAPTL KWGLVVAGIS DMQRPVERVS GTQNLSLMAT  60
   61 AVIWTRWSFV IRPKNYLLAS VNFFLGLTAS YQLARIARYR LREGDSAGEV LRYIVNGPRD 120
  121 PAGAAA

Type	Start	End	Confidence
Cytoplasmic	1	49	0.57
Transmembrane Helix	50	68	0.53
Non-Cytoplasmic	69	75	0.63
Transmembrane Helix	76	94	0.73
Cytoplasmic	95	126	0.66