YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45190274, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTNLFIRNP CGTRLFFGNL CRLVAPSYRS QMMGSAIRAR AVSLTKNAGI TSPRMMLFTS  60
   61 ITATGLLMPL FKSPIIRNDA YMGVHDVKYP QVGYGAGVTS KEVRRGRLNG KLDYRQLCLG 120
  121 SIAGVALGIV VGKISHALVF ITGLGLLALQ WLQSRGIVDK GTTRGLSRYL ISTGREKIDL 180
  181 NTLFWEKPSF KISFLLTFVL AALNV

Type	Start	End	Confidence
Cytoplasmic	1	54	0.77
Transmembrane Helix	55	75	0.59
Non-Cytoplasmic	76	121	0.53
Transmembrane Helix	122	152	0.71
Cytoplasmic	153	205	0.73