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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44983050, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASIIGLWA LSSLIGVSNG LNNMEGSRER TNASMSGVDV NSGSDISIET AVVGAAANGQ  60
   61 GAVGGVADER RGLVSLAAPA KYPYMEHLGL RPLPRNALLA SLQFYMQSNS FQVGKQQDGS 120
  121 DYNHYTVFPK SITPVMENTQ TRQLHLRFTH GLWDHENWGQ LPHAGAKSGG SGVELWAVME 180
  181 AGSRDEAFRN WLLMTHSLSG LFCASINFID STKTTFPVSS FQPRTDERIP LLNGTNHLYL 240
  241 LRGSLANEPV CTENLTPFLK LLPTRGRQGL STLLEGHKVF GSRWHSLSLD VSTICSEEGL 300
  301 CHYEMEEFIE LALDVPSTLA RVERPIPKPL DGSNLRCDTC KHHDSWTCFP LSDSTSAKIE 360
  361 LSKLFGRYIM DATELSDTPS KACVKVSDNW KVLIKAGDAY FTTATNCFDV KGKKWHDIYL 420
  421 DTDDTTKVYP VDSSPVFVTR SLTGYSQDKG GLRTVFRNPT DQPVSLVYFE SLPWYMRLYL 480
  481 STVKIETDDN LSINDVIKST YYLPARDRER PTHLEYQMVI PANTTFALTY QFDKSLLQYA 540
  541 EYPPDANHGF EIESAVVTVL SPFKYEFRTA TLLLSLSTPD FSMPYNVIIL TSTVMGLIFG 600
  601 TLFNMLVKKI TTVEEADKHM QHSGLRARAR SIKQNLFDKL GSQKLKKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle