YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44983049
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTLHNPCV LLKRIFSLRE QSSLLLCVDT VAQSAHYLIR EFVHQLKDTP LQLLYLSYET  60
   61 ANRPSYATQF INCSALSAEE VVAQAKRALA GSGAPGESQW LVVVDSMNYV PVDELGRFVG 120
  121 GLAGPGVTVV ATYHSSMPRF TEPALQHYPD GLELLRFMSV TILEVAPLVP EEDAEELEEQ 180
  181 LARFVVPRRL NGPVYALTLT NRRKSGRSLS YRFRIDSTNH SYSLLDGAAD RDTEQPAHLE 240
  241 GLTTFNLSTT QKQKQAKEKL ELPFLEAQSF NTGGAIVYEF EKDDDYDEED PYEDPF

Type	Start	End	Confidence
Signal Peptide	1	34	0.59
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	296	0.99