YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44982957, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLWSFAVFW FYLASFFVVG TLAAVLVLPF MAASLLFATG VVICGFFSNL SFRSAQLVYD  60
   61 QFVGTLQLTL QHMAEQVPPA SDMQQPSGST IDTGAMLAHT FDSSSYGATT QTGSGPESGP 120
  121 VPELGSEVSA SPSPELAALP VAHKRSGRRT GTLASGM

Type	Start	End	Confidence
Cytoplasmic	1	7	0.68
Transmembrane Helix	8	28	0.88
Non-Cytoplasmic	29	31	0.55
Transmembrane Helix	32	52	0.80
Cytoplasmic	53	157	0.78