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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45188104, gi|...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQEQPQSNI VQDFTYAWNK GVAPITQHFI KKYYDYVRLD GSDANGRMQS SRPEKPRRVR  60
   61 RLLRYIRRQL QRLQILNNDN IILDKLLQEK QHATSYDDWL AAVVRLDEMT QKEAWKQEEE 120
  121 TTLYDWKLVK GQTEKMRAAR EQRDWLQLLY IIRTTWVRDL GNMCNVNLYR HSHVGTKYII 180
  181 DEYVEESKRS LHELVYQSNL DMNYMLGMLV QTRKNIGRTA LVLSGGSTFG LFHIGVLSTL 240
  241 FEQELLPRVI SGSSAGAIVA SILCVHHKHE LVQLIEDVLQ KEFNIFEDES QKVKHESLLM 300
  301 KISRFLKNGT WFDNKHLINT MIGFLGDLTF REAYNRTGKI LSITVSPASV YEQPRLLNQL 360
  361 TAPNVLIWSA VCASCSLPGV FPSTPIYEKD PKTGETTEWN SSSVKFVDGS VDNDLPIAKL 420
  421 SEMFNVDHII ACQVNIHAFP FLKLSLSCVG GEVEDEFSAR LKQNLSTVYN FVVNEVIHLL 480
  481 ELGTELGIAR NLFTKMRSVL SQQYSGDITI LPDLKMLLRI KELLANPTQE FLLRETVNGA 540
  541 RATWPKIAII KNHCGQEFEL DRVINYLKGK LISKPSQSHG TLHFVDNSIS LINSPIIYHQ 600
  601 DQSTIIREFL DAHKAQDGLV VDKPTKLIHA GGRYSYYGAA KSKVHFRRKS ESSAEGKGFA 660
  661 NLAQPRSASS SPFISEKVMP IVIGYHGGLR RKRSGGYLTF SAGKKSPSSS AGKSLNNYTI 720
  721 SESQTGDDNC SIVSEPSGIL GGVQHVDDED EISPRLDLTD RGPEVSNSGG TCQIVKTTT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle