YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45187988, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKRTLPLLT KFNPKLLGHS APAAGAAGPS PSIGSSTSTS ADEISHFQQL APTWWDTNGS  60
   61 QRILHKMNLS RMDFIQRILS EQMKVTTPDV YVPGFNYKAH LPAAVSEQIQ SELNTEVRSL 120
  121 LRQQRLQVLD VGCGGGILAE SLGRQPYVEK VYGIDLTPDC IAAARAHRDK DPVLREKIQY 180
  181 DVLPLEEVEG QFDVVTMFEM LEHVENPSAV LEHAWRRLRP EGILFVSTIN RNLLSWFTTI 240
  241 CMAEHVLRVV PKGTHHLEKY LDATEVQDWF QQHTPGAHRI LDLKGNMYVP MWGWVEHDLS 300
  301 SIGNYCMAVK KLR

Type	Start	End	Confidence
Signal Peptide	1	34	0.94
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	313	0.99