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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATG9_ASHGO
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQSEDTIQH ERKNTFLSRV FGVHSSEVGD SIETAELSQY PIQIARSGSN AIDESRVIES  60
   61 DQASSSEEED TDGHDLSVAE NMTSYNGAQG SGSEDSDVPF SDQELETIET YTIAKVGQGS 120
  121 SSEDDRLQAD SAEEEDALLF QHRLQDGSKG RNKVSSQPLG LKRILGSKGK SILGKEPASQ 180
  181 EDSFIFRKGP TWDEENQLRP ESKRPGLLSG KSNARLSSPS RPSPLSARER ALWKWANVEN 240
  241 LDGFLQDVYS YYLGNGFYCI MIEKILNLLT LLFIVFISTY MSHCIDYSKL PNGHKFSDVR 300
  301 VDQCYETQIT GTTKLLFWIF GVFVVLKVVQ MYFDFRRIHE IHNFYTYLLN ISDKELQTIP 360
  361 WQSVIHQIMR LKDQNAVTAN VVEVKAKNHI DAHDVANRIM RKENYLIALY NKDILHLSLP 420
  421 IPLYRTSTLT KTLEWNIHLC IIGFAFNEAG FLKQSFLNPA QREFLSEELK KRFILAGFLN 480
  481 IILAPFLVVY FVLLYFFRYF NEYKTSPGSL STRQYTPIAE WKFREYNELY HLFKKRMGLS 540
  541 YEVANTYINQ FPNALGDYFF KFVKFISGSF VAILALMTVL DPENFLNFEL TADRTVLFYM 600
  601 TVLGTIWAVC HSAVNDNCSV FDPEDSLKEL ITYIHYAPKE WDGRYHTDEV KQEFCKLYNL 660
  661 RVILLLRELA SLIMTPFILW FSLPNSAESI VDFFREVTVY GDGLGYVCKY AMFDENCKKG 720
  721 LRTNKHLQGT QTKYGHSLGD DHDSSDEETD KGMNKMIQSY MYFVDDYQNS VNAVGKYQIP 780
  781 KTQNLSHESK YNMKSHQHYS WKKQFKLGSK PEDFKIGSVT PRALSSSILA NKPKSNLRAR 840
  841 LDPEISHSNV QFDDLGESFI NSIPVADYDP IERSDAMGGN GVLGLLNQYY RKSDVGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle