YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33236076, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMINFIRSYA LYFAWAISCA GTLISIFYSY ILNVEPCILC YYQRICLFPL TVILGISAYR  60
   61 EDSSIKLYIL PQAVLGLGIS IYQVFLQEIP GMQLDICGRV SCSTKIFLFS YVTIPMASVV 120
  121 AFGAIVCLLV LTKKYRG

Type	Start	End	Confidence
Cytoplasmic	1	10	0.87
Transmembrane Helix	11	32	0.94
Non-Cytoplasmic	33	39	0.84
Transmembrane Helix	40	59	0.94
Cytoplasmic	60	66	0.87
Transmembrane Helix	67	86	0.94
Non-Cytoplasmic	87	110	0.88
Transmembrane Helix	111	132	0.92
Cytoplasmic	133	137	0.93