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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33087516
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRRPPSQGR WSASHQKLLL AFAFILIPWL QLADAQQQPQ QPQIRIHSQR GDAPLDKVAD  60
   61 DANTRWYATH AAPDVHPEAK FDTVNRKQKQ QSTASPQQHQ KYRRAPYDYA SKDKAQNRYA 120
  121 QHPIRESEKP NYVKVPNDAS ALATLAPAQP VRAPHTSRHH WPSSSAASGL ASPQNARSLE 180
  181 DWEVEDFVLL ATVDGDLYAS DRKTGRHLWH LEVDQPVVET KHYRTNNSVL DDDYRPVDHY 240
  241 IWAVEPSRDG GLYVWIPDSG AGLVRTGFTM KHLVEELAPY AGDEPPVVYT GDKKTTMVTL 300
  301 DAATGRVLKW FGSSGSQVNE AESCLRPNAF DDRDTTECSS MGTITLGRTE YTVGIQRRDG 360
  361 RPIATLKYAE WGPNTFDSDL YQQYHASLDN HYITSQHDGR IYAFDKSQAE NDLPLYTHKF 420
  421 SSPVARVFDV CRPWDANAGS NPELVVLPQP PIPALDESTV KMRSNSIFLN QTESGDWYAL 480
  481 SGRAYPLILD APVAQISRDD LWDMAHAFDS INPNKLSKAL VGTHFLNPVK STGYHQPPTL 540
  541 PAGALDEYYE DLENASNNAH AVTNTVPEEP TIITKVKALP QSAANSVIDF VSNPILIIFL 600
  601 IGSLIYNEKK LRRSYHRFRT HGTIKDVYPF FVIESEAGDE SGDDKDGVFP SSPSPRSQPQ 660
  661 DQNAEDHLSR HKVERNAGDQ DKVKDNRSLH DVSDTLEPSN KTVEKTADVV KQVDVAGPDA 720
  721 PSTDSNGAAP EKKKKAHRGR RGGVKHRKGR PTDGSQSHEN DPALTTVDEA VSNAKKLGDR 780
  781 PSLEPDVMTI YNDMQAVTGS VISMGNIEVD TDVELGMGSN GTVVFAGRFD GRDVAVKRMT 840
  841 IQFYDIATRE TKLLRESDDH PNVIRYYSQV QRGDFLYIAL ERCAASLADV IEKPYAFGEL 900
  901 AKAGQKDLPG VLYQITNGIS HLHSLRIVHR DLKPQNILVN LDKDGRPRLL VSDFGLCKKL 960
  961 EDRQSSFGAT TGRAAGTSGW RAPELLLDDD GQNPAAIDSS THSGSHTILV GDPNSLSNGG1020
 1021 RATRAIDIFS LGLVFFYVLT NGSHPFDCGD RYMREVNIRK GNYNLDPLDA LGDFAYEAKD1080
 1081 LIASMLQASP KARPDSREVM AHPFFWSPKK RLAFLCDVSD SLEKEVRDPP SPALVELERH1140
 1141 APEVIKGDFL KVLTRDFVES LGKQRKYTGN KLLDLLRALR NKRNHYEDMS DSLKRSVGSL1200
 1201 PDGYLAYWTV KFPMLLLTCW NVVYNLEWEK TDRFREYYEP AGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle