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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33086684
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLLALLAL LQLGPGLAAL SCPQNVNIVG GNFTLSRGWA PGSVLIYSCP LGRYPSPAWR  60
   61 ECQSNGQWQT PRASSLPTLR SSRLAKAVCK PVRCPAPTSF ENGIYIPRLG SYPVGGNLSF 120
  121 ECEHGFTLRG SPVRYCRPNG VWDGETDHEN ATGTNTYEAL NSVYLMMNNQ MDRLGMETSA 180
  181 WQEIRHAIIL LTDGKSNMGG SPKPAVDNIR EILGISRNRN DYLDVSKLTD TICGVGNMSV 240
  241 NASDQERTPW QVTFKPKSKE TCQGSLISDQ WVLTAAHCFH DAQMEDRHLW RVIVGDPTSH 300
  301 HGKEFHVEEV LVAPGFNVHA KQSQGISEFY ADDIALLKLS QRVKMSSHAR PICLPCTVGA 360
  361 NMALRRSPGS TCKDHETELL SQQKVPAHFV ALNGNRMNIN LRTGPERTSC IEAVSQNKGS 420
  421 FPGLTNVSEV VTDQFLCSGM EGDDSPCKGG PAIRCPRPQD FENGEFWPRS PYYNLSDQIS 480
  481 FQCYDGYTLR GSANRTCQEN GRWDGQTAIC DDGAGYCPNP GIPIGTRKVG SQYRLEDTVT 540
  541 YHCSRGLVLR GSQQRRCQEG GSWSGTEPSC QDSFMYDSPQ EVAEAFLSSL TETIEGADAE 600
  601 DGHSPGEQQK RKIILDPSGS MNIYMVLDGS DSIGASNFTG AKRCLANLIE KVASYGVKPR 660
  661 YGLVTYATVP KVLVRVSEER SSDADWVTEK LNQISYEDHK LKSGTNTKKA LQAVYSMMSW 720
  721 PGDAPPEGWN RTRHVIIIMT DGLHNMGGDP VTVIEDIRDL LDIGRDRKNP REDYLDVYVF 780
  781 GVGPLVDPVN INALASKKNN EQHVFKVKDM EDLENVFYKM IDETKSLGLC GMVWEHQKGG 840
  841 DYYKQPWQAK ISVTRPLKGH ENCMGAVVSE YFVLTAAHCF TVEDQKHSIK VNVEGKRRDL 900
  901 EIEEVLFHPN YDINGKKAEG ISEFYDYDVA LIKLKTKLKY SQTLRPICLP CTEGTTRALR 960
  961 LPQTATCKQH KEELLPMKDV KALFVSEEGK KLTRKEVYIK NGEKKASCER DATKAQGYEK1020
 1021 VKVASEVVTP RFLCTGGVDP YADPNTCKGD SGGPLIVHKR SRFIQVGVIS WGVVDVCKDP1080
 1081 RRQQLVPSYA RDFHINLFQV LPWLKEKLKD EDLGFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle